C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase pseudogene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450472 GAPDHP14-001 ENSG00000236056 9606 + 21:29222321-29223257 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartLiverOvaryPlacentaTestisENST00000450472
Transcript ID Adrenal Bladder Brain Breast Heart Liver Ovary Placenta Testis
ENST00000450472 0.280±0.00 0.279±0.00 0.019±0.00 0.018±0.00 0.030±0.00 0.206±0.00 0.042±0.00 0.113±0.01 0.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DA CIL_0003DA_0001 CGP 21:29077471-29630751
CIL_000317 CIL_000317_0001 CGP 21:29194071-29940033

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 542
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 542
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 542
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 542
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 514
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 503
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 503
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 484
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 431
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000182773 Gm7545-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000118730 Gm13326-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000182698 Gm4398-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000106038 RP24-347J6.6-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000182862 Gm7456-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000187161 RP24-347J6.5-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000182469 Gm9167-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000182090 Gm6463-001 processed_pseudogene Mus_musculus 7.00649e-44 182
ENSMUST00000178571 RP24-542I6.2-001 processed_pseudogene Mus_musculus 8.99634e-43 178
ENSMUST00000182998 Gm21430-001 processed_pseudogene Mus_musculus 2e-40 171
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 7e-39 165
ENSMUST00000182376 Gm26959-001 processed_pseudogene Mus_musculus 3e-32 143
ENSMUST00000121921 Gm9225-001 processed_pseudogene Mus_musculus 0.0000000006 69

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