C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 161A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182980 Tmem161a-011 ENSMUSG00000002342 10090 + 8:70172408-70182850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182980 22.072±5.92 53.991±11.71 13.752±0.39 10.175±1.62 20.159±6.66 17.368±4.37 20.583±5.38 18.670±2.98 11.194±5.15 19.502±6.16 13.976±2.14 21.030±9.60 15.099±2.44 1.738±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BD CIL_0006BD_0002 CGP 8:70152778-70183681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000162044 TMEM161A-004 protein_coding Homo_sapiens 0 1182
ENST00000450333 TMEM161A-002 protein_coding Homo_sapiens 0 704
ENST00000587406 TMEM161A-001 retained_intron Homo_sapiens 0 536
ENST00000587583 TMEM161A-006 protein_coding Homo_sapiens 0 941
ENST00000587925 TMEM161A-012 protein_coding Homo_sapiens 0 200
ENST00000587985 TMEM161A-019 nonsense_mediated_decay Homo_sapiens 0 1157
ENST00000589448 TMEM161A-003 retained_intron Homo_sapiens 0 1026

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