C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosome production factor 2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183052 Rpf2-003 ENSMUSG00000038510 10090 - 10:40223888-40247027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartLiverLungOvaryENSMUST00000183052
Transcript ID Adipose Breast Colon Heart Liver Lung Ovary
ENSMUST00000183052 2.176±0.07 0.545±0.00 1.227±0.39 1.056±0.00 0.299±0.00 0.801±0.00 1.626±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FT CIL_0002FT_0002 CGP 10:40033535-40247036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368864 RPF2-002 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000424137 RPF2P1-001 processed_pseudogene Homo_sapiens 0 416
ENST00000425871 RPF2-003 protein_coding Homo_sapiens 0 422
ENST00000441448 RPF2-001 protein_coding Homo_sapiens 0 455
ENST00000607388 RPF2-004 nonsense_mediated_decay Homo_sapiens 0 455

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