C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: etoposide induced 2.4 mRNA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183360 Ei24-006 ENSMUSG00000062762 10090 - 9:36786523-36797361 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000183360
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000183360 71.308±0.00 85.045±21.28 27.577±5.26 36.987±8.59 39.918±0.00 54.491±0.54 35.796±7.61 23.938±5.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000559 CIL_000559_0002 CGP 9:36729344-36797361
CIL_00080D CIL_00080D_0002 VISTA 9:36753339-37355278

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006914 IMP autophagy
GO:0008630 IDA intrinsic apoptotic signaling pathway in response to DNA damage
GO:0030308 ISS negative regulation of cell growth
GO:0042493 IMP response to drug
GO:0050885 IMP neuromuscular process controlling balance
GO:2001244 IMP positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278903 EI24-002 protein_coding Homo_sapiens 2e-34 152
ENST00000397776 EI24P2-001 processed_pseudogene Homo_sapiens 0.000000000001 79
ENST00000524723 EI24-011 protein_coding Homo_sapiens 5e-35 152
ENST00000527131 EI24-008 protein_coding Homo_sapiens 3e-35 152
ENST00000527235 EI24-018 protein_coding Homo_sapiens 1e-34 152
ENST00000527520 EI24-013 protein_coding Homo_sapiens 3e-35 152
ENST00000527842 EI24-009 protein_coding Homo_sapiens 5e-35 152
ENST00000529765 EI24-014 retained_intron Homo_sapiens 5e-35 152
ENST00000529812 EI24-007 protein_coding Homo_sapiens 1e-19 100
ENST00000531636 EI24-005 nonsense_mediated_decay Homo_sapiens 9e-35 152
ENST00000534546 EI24-006 protein_coding Homo_sapiens 1e-34 152
ENST00000615917 EI24-003 protein_coding Homo_sapiens 0 254
ENST00000618552 EI24-004 protein_coding Homo_sapiens 1e-34 152
ENST00000620753 EI24-001 protein_coding Homo_sapiens 1e-34 152

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