C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family M (with RUN domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184350 Plekhm1-002 ENSMUSG00000034247 10090 - 11:103366617-103394768 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000184350
Transcript ID Muscle
ENSMUST00000184350 2.925±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D9 CIL_0004D9_0003 CGP 11:103331497-103412687

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000430334 PLEKHM1-001 protein_coding Homo_sapiens 0 1836
ENST00000446609 PLEKHM1-004 nonsense_mediated_decay Homo_sapiens 0 1476
ENST00000578036 PLEKHM1P-003 processed_transcript Homo_sapiens 0 1770
ENST00000579131 PLEKHM1-012 processed_transcript Homo_sapiens 0 363
ENST00000579197 PLEKHM1-003 nonsense_mediated_decay Homo_sapiens 0 1836
ENST00000580205 PLEKHM1-006 processed_transcript Homo_sapiens 0 928
ENST00000580404 PLEKHM1-008 processed_transcript Homo_sapiens 0 660
ENST00000581448 PLEKHM1-002 nonsense_mediated_decay Homo_sapiens 0 1836
ENST00000582035 PLEKHM1-007 retained_intron Homo_sapiens 0 928
ENST00000582201 PLEKHM1P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1770
ENST00000582986 PLEKHM1P-002 processed_transcript Homo_sapiens 0 1770
ENST00000591580 PLEKHM1-017 protein_coding Homo_sapiens 0 300
ENST00000606688 RP11-927P21.11-001 transcribed_unprocessed_pseudogene Homo_sapiens 7e-40 165
ENST00000613787 PLEKHM1-202 protein_coding Homo_sapiens 0 1836
ENST00000617688 PLEKHM1-201 protein_coding Homo_sapiens 0 1836

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