C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 5330417C22 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185128 5330417C22Rik-006 ENSMUSG00000040412 10090 - 3:108458069-108536522 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverOvaryPlacentaENSMUST00000185128
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Ovary Placenta
ENSMUST00000185128 0.011±0.00 0.341±0.10 0.054±0.00 0.197±0.03 0.017±0.00 0.044±0.01 0.055±0.03 0.315±0.00 0.047±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369936 KIAA1324-001 retained_intron Homo_sapiens 0 2459
ENST00000369938 KIAA1324-003 processed_transcript Homo_sapiens 0 2459
ENST00000369939 KIAA1324-002 protein_coding Homo_sapiens 0 3356
ENST00000457623 KIAA1324-006 protein_coding Homo_sapiens 0 2124
ENST00000464345 KIAA1324-005 retained_intron Homo_sapiens 2e-33 147
ENST00000490758 KIAA1324-011 retained_intron Homo_sapiens 0 649
ENST00000526264 KIAA1324-015 protein_coding Homo_sapiens 0 222
ENST00000527996 KIAA1324-009 nonsense_mediated_decay Homo_sapiens 0 3260
ENST00000529753 KIAA1324-008 protein_coding Homo_sapiens 0 2333
ENST00000531664 KIAA1324-013 protein_coding Homo_sapiens 0 220
ENST00000533147 KIAA1324-012 protein_coding Homo_sapiens 0 222
ENST00000534476 KIAA1324-014 protein_coding Homo_sapiens 0 220

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