C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189037 Sctr-002 ENSMUSG00000026387 10090 + 1:120007034-120063534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000189037
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000189037 2.081±1.26 0.047±0.02 0.236±0.12 0.919±0.36 0.181±0.07 0.140±0.06 0.330±0.12 0.027±0.01 0.120±0.00 0.200±0.09 0.202±0.08 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093M CIL_00093M_0002 VISTA 1:119723864-120325096

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005881 ISS cytoplasmic microtubule
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143759 vipr1b-001 protein_coding Danio_rerio 0.0000000000002 82
ENST00000019103 SCTR-001 protein_coding Homo_sapiens 0 1181
ENST00000485440 SCTR-002 retained_intron Homo_sapiens 0 915

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