C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: progesterone receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189181 Pgr-201 ENSMUSG00000031870 10090 + 9:8899833-8968611 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000189181
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000189181 7.964±7.93 0.023±0.00 0.130±0.01 0.391±0.32 2.037±0.53 0.004±0.00 0.081±0.03 0.004±0.00 0.384±0.08 2.215±1.01 0.246±0.21 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003T4 CIL_0003T4_0002 CGP 9:8544196-8968611

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001542 IMP ovulation from ovarian follicle
GO:0002070 IMP epithelial cell maturation
GO:0003707 IDA steroid hormone receptor activity
GO:0004879 IMP ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005102 IEA receptor binding
GO:0005496 IEA steroid binding
GO:0005515 IEA protein binding
GO:0005634 IC nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0010629 IEA negative regulation of gene expression
GO:0019899 IEA enzyme binding
GO:0030879 IMP mammary gland development
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0050678 IMP regulation of epithelial cell proliferation
GO:0050847 IDA progesterone receptor signaling pathway
GO:0060748 IMP tertiary branching involved in mammary gland duct morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263463 PGR-006 protein_coding Homo_sapiens 0 1210
ENST00000325455 PGR-001 protein_coding Homo_sapiens 0 2270
ENST00000526300 PGR-007 nonsense_mediated_decay Homo_sapiens 0 1210
ENST00000528960 PGR-004 nonsense_mediated_decay Homo_sapiens 0 1031
ENST00000534013 PGR-002 protein_coding Homo_sapiens 0 1279
ENST00000534780 PGR-005 nonsense_mediated_decay Homo_sapiens 0 1657
ENST00000617858 PGR-201 protein_coding Homo_sapiens 0 1369
ENST00000619228 PGR-202 protein_coding Homo_sapiens 0 1190

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