C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IQ motif containing with AAA domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189690 Iqca-005 ENSMUSG00000026301 10090 - 1:90042135-90090144 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000189690
Transcript ID Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000189690 0.016±0.00 0.630±0.00 0.110±0.00 0.081±0.04 0.156±0.14 1.175±0.31 1.793±0.60 0.182±0.13 1.925±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RK CIL_0007RK_0002 VISTA 1:89547708-90149945
CIL_0008K4 CIL_0008K4_0002 VISTA 1:89625517-90226000
CIL_0007XN CIL_0007XN_0002 VISTA 1:89706775-90307806
CIL_0008Q8 CIL_0008Q8_0002 VISTA 1:89946249-90547693
CIL_0002YM CIL_0002YM_0002 CGP 1:89950220-90153401
CIL_0007QN CIL_0007QN_0002 VISTA 1:89988936-90590388
CIL_0002W2 CIL_0002W2_0002 CGP 1:90042132-90216751

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254653 IQCA1-002 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000309507 IQCA1-201 protein_coding Homo_sapiens 0 1075
ENST00000409100 IQCA1-009 processed_transcript Homo_sapiens 0 490
ENST00000409907 IQCA1-001 protein_coding Homo_sapiens 0 1075
ENST00000431676 IQCA1-202 protein_coding Homo_sapiens 0 1074

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