C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002W2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132321-ENSG00000144476 CGP 9606 2:236324147-236582358
GeneTranscriptPositionBiotype
ENSG00000132321 (IQCA1)
IQ motif containing with AAA domain 1 		ENST00000254653 (IQCA1-002) 236324151-236507532 nonsense_mediated_decay
ENST00000309507 (IQCA1-201) 236324147-236507535 protein_coding
ENST00000409100 (IQCA1-009) 236324653-236346751 processed_transcript
ENST00000409907 (IQCA1-001) 236324151-236507542 protein_coding
ENST00000418802 (IQCA1-005) 236377116-236503696 protein_coding
ENST00000431676 (IQCA1-202) 236324147-236503697 protein_coding
ENST00000465621 (IQCA1-006) 236392329-236455111 processed_transcript
ENST00000467572 (IQCA1-008) 236380613-236412891 processed_transcript
ENST00000479471 (IQCA1-007) 236324691-236332056 retained_intron
ENST00000479783 (IQCA1-004) 236324671-236333363 retained_intron
ENSG00000144476 (ACKR3)
atypical chemokine receptor 3 		ENST00000272928 (ACKR3-001) 236569641-236582358 protein_coding
ENST00000447924 (ACKR3-002) 236567787-236581097 protein_coding
ENSG00000231546 (RPL3P5)
ribosomal protein L3 pseudogene 5 		ENST00000441645 (RPL3P5-001) 236407846-236409077 transcribed_processed_pseudogene
ENSG00000270540 (RP11-785G17.1)
 ENST00000605740 (RP11-785G17.1-001) 236367560-236369102 antisense
CIL_0002W2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026301-ENSMUSG00000044337 CGP 10090 1:90042132-90216751
GeneTranscriptPositionBiotype
ENSMUSG00000026301 (Iqca)
IQ motif containing with AAA domain 		ENSMUST00000113094 (Iqca-001) 90042132-90153401 protein_coding
ENSMUST00000186403 (Iqca-003) 90082266-90090143 processed_transcript
ENSMUST00000186522 (Iqca-002) 90127144-90153401 processed_transcript
ENSMUST00000189011 (Iqca-004) 90059457-90066924 protein_coding
ENSMUST00000189690 (Iqca-005) 90042135-90090144 processed_transcript
ENSMUSG00000044337 (Ackr3)
atypical chemokine receptor 3 		ENSMUST00000065587 (Ackr3-001) 90203980-90216751 protein_coding
ENSMUST00000159654 (Ackr3-002) 90204006-90213833 protein_coding
ENSMUSG00000100850 (RP23-289I3.1)
RIKEN cDNA 4930434B07 gene 		ENSMUST00000190254 (RP23-289I3.1-001) 90153628-90159462 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002W2_0001ENSG00000132321ENST00000254653ENST00000309507ENST00000409100ENST00000409907ENST00000418802ENST00000431676ENST00000465621ENST00000467572ENST00000479471ENST00000479783ENSG00000144476ENST00000272928ENST00000447924ENSG00000231546ENST00000441645ENSG00000270540ENST00000605740CIL_0002W2_0002ENSMUSG00000026301ENSMUST00000113094ENSMUST00000186403ENSMUST00000186522ENSMUST00000189011ENSMUST00000189690ENSMUSG00000044337ENSMUST00000065587ENSMUST00000159654ENSMUSG00000100850ENSMUST00000190254
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002W2_0001ENSG00000132321ENST00000254653ENST00000309507ENST00000409100ENST00000409907ENST00000418802ENST00000431676ENST00000467572ENST00000479783ENSG00000144476ENST00000272928ENST00000447924ENSG00000231546ENST00000441645ENSG00000270540ENST00000605740CIL_0002W2_0002ENSMUSG00000026301ENSMUST00000113094ENSMUST00000186403ENSMUST00000186522ENSMUST00000189690ENSMUSG00000044337ENSMUST00000065587ENSMUSG00000100850ENSMUST00000190254
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132321 ENST00000254653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A
ENST00000309507 N/A N/A N/A 0.486±0.00 N/A 0.066±0.00 0.074±0.00 N/A 0.034±0.00 0.804±0.21 N/A N/A 0.059±0.00 2.596±0.00
ENST00000409100 0.331±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 0.534±0.31 0.327±0.08 N/A
ENST00000409907 N/A 0.163±0.00 N/A N/A 0.522±0.00 N/A N/A 0.902±0.00 N/A 1.396±0.00 N/A 0.420±0.12 0.103±0.01 0.789±0.00
ENST00000418802 0.122±0.00 N/A N/A N/A 0.082±0.00 0.535±0.00 N/A N/A N/A N/A 0.054±0.00 N/A N/A 1.872±0.89
ENST00000431676 0.082±0.00 N/A 0.327±0.00 N/A N/A 0.126±0.00 N/A 1.185±0.00 N/A N/A N/A N/A 0.030±0.00 N/A
ENST00000465621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467572 N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENST00000479471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479783 N/A 0.103±0.00 N/A 0.600±0.00 N/A N/A 0.036±0.00 N/A 0.092±0.00 N/A N/A 0.094±0.00 N/A N/A
ENSG00000144476 ENST00000272928 10.976±0.00 4.465±0.00 0.227±0.00 0.423±0.32 5.226±2.39 4.895±3.72 1.496±0.09 0.879±0.00 2.280±0.65 2.848±1.27 2.584±1.70 1.399±0.80 13.917±1.47 2.070±0.00
ENST00000447924 26.166±0.00 15.772±0.00 0.132±0.00 2.755±1.47 13.134±11.88 10.232±6.96 2.703±2.19 3.640±0.00 5.547±0.00 5.549±4.70 3.988±0.00 4.343±1.58 17.780±4.86 7.505±0.05
ENSG00000231546 ENST00000441645 0.108±0.00 0.132±0.00 N/A 0.028±0.00 0.062±0.00 0.111±0.05 0.017±0.00 0.045±0.00 0.039±0.00 0.015±0.00 N/A 0.050±0.00 N/A 0.065±0.04
ENSG00000270540 ENST00000605740 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.387±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026301 ENSMUST00000113094 N/A N/A 0.004±0.00 0.045±0.00 N/A N/A 0.108±0.00 N/A N/A 1.014±0.14 N/A 0.662±0.37 0.027±0.00 4.972±2.93
ENSMUST00000186403 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.716±0.52 0.379±0.01 N/A
ENSMUST00000186522 N/A N/A 0.007±0.00 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A
ENSMUST00000189011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189690 N/A N/A 0.016±0.00 0.630±0.00 N/A N/A 0.110±0.00 0.081±0.04 0.156±0.14 1.175±0.31 N/A 1.793±0.60 0.182±0.13 1.925±0.96
ENSMUSG00000044337 ENSMUST00000065587 84.033±34.12 162.011±11.25 28.421±0.00 14.001±11.99 81.603±20.14 29.701±5.94 84.359±20.51 67.642±18.36 1.945±0.91 39.028±5.30 2.659±1.68 47.409±23.78 10.237±6.04 4.173±2.17
ENSMUST00000159654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100850 ENSMUST00000190254 N/A N/A N/A 0.028±0.00 N/A N/A N/A 0.241±0.00 N/A 0.056±0.00 N/A 0.071±0.01 0.022±0.00 1.784±0.95

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