C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700001J11 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190330 RP23-252B13.1-001 ENSMUSG00000101963 10090 + 9:40050555-40053028 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000190330
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000190330 0.107±0.06 0.053±0.00 0.051±0.00 0.105±0.01 0.172±0.10 0.065±0.04 0.133±0.07 0.104±0.04 0.050±0.03 0.151±0.08 0.025±0.01 0.214±0.08 0.076±0.04 106.096±46.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341084 RNF19A-001 protein_coding Homo_sapiens 0 2272
ENST00000519409 SPAG1-003 processed_transcript Homo_sapiens 1e-39 167
ENST00000519449 RNF19A-003 protein_coding Homo_sapiens 0 2272
ENST00000520903 RNF19A-006 retained_intron Homo_sapiens 0 440
ENST00000523255 RNF19A-007 processed_transcript Homo_sapiens 0 514
ENST00000523644 RNF19A-014 processed_transcript Homo_sapiens 0 224
ENST00000524233 RNF19A-013 retained_intron Homo_sapiens 0 405
ENST00000616528 RNF19A-201 protein_coding Homo_sapiens 0 2272

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