C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-ral simian leukemia viral oncogene homolog A (ras related)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000005257 RALA-001 ENSG00000006451 9606 + 7:39623483-39708124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000005257
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000005257 13.351±0.00 12.410±0.00 1.154±0.00 7.281±3.82 11.698±7.35 10.226±4.20 3.926±3.25 7.127±4.61 3.454±0.44 16.917±8.68 3.549±0.00 9.478±4.61 12.368±3.24 8.812±5.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 IDA cytokinesis
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005886 IEA:IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006887 IEA exocytosis
GO:0006913 IEA nucleocytoplasmic transport
GO:0006935 TAS chemotaxis
GO:0007165 TAS:IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007265 IEA:TAS Ras protein signal transduction
GO:0009986 IDA cell surface
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016032 IEA viral process
GO:0017157 IDA regulation of exocytosis
GO:0030139 IDA endocytic vesicle
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0031532 IDA actin cytoskeleton reorganization
GO:0031755 IDA Edg-2 lysophosphatidic acid receptor binding
GO:0032154 IDA cleavage furrow
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0051491 IDA positive regulation of filopodium assembly
GO:0051665 IDA membrane raft localization
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009003 Rala-001 protein_coding Mus_musculus 0 1666

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