C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SprT-like N-terminal domain | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000008440  |
SPRTN-003 |
ENSG00000010072 |
9606 | + |
1:231338256-231352521  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006B5 | CIL_0006B5_0001 | CGP | 1:231241207-231337852 |
| CIL_0006B4 | CIL_0006B4_0001 | CGP | 1:231332753-231355023 |
| CIL_0006AZ | CIL_0006AZ_0001 | CGP | 1:231337104-231425044 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005694 | IEA | chromosome |
| GO:0006974 | IDA | cellular response to DNA damage stimulus |
| GO:0009411 | IDA | response to UV |
| GO:0016607 | IDA | nuclear speck |
| GO:0019985 | IDA | translesion synthesis |
| GO:0031398 | IDA | positive regulation of protein ubiquitination |
| GO:0043130 | IDA | ubiquitin binding |
| GO:0046872 | IEA | metal ion binding |
| GO:0070530 | IDA | K63-linked polyubiquitin binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000034467
|
Sprtn-201 | protein_coding | Mus_musculus | 0 | 259 |
