C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000180166 FGF20-001 ENSG00000078579 9606 - 8:16992169-17002181 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyOvaryPlacentaTestisENST00000180166
Transcript ID Adipose Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000180166 0.007±0.00 0.132±0.02 0.012±0.00 0.022±0.00 0.215±0.00 0.099±0.04 0.028±0.00 0.057±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VY CIL_0001VY_0001 CGP 8:16107878-17002181
CIL_00006U CIL_00006U_0002 CGP 8:16992169-17122644

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005104 IEA fibroblast growth factor receptor binding
GO:0005576 TAS extracellular region
GO:0007165 TAS signal transduction
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0008083 IEA growth factor activity
GO:0008284 IEA positive regulation of cell proliferation
GO:0008286 TAS insulin receptor signaling pathway
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0030154 IEA cell differentiation
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0045087 TAS innate immune response
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048015 TAS phosphatidylinositol-mediated signaling
GO:0060043 IEA regulation of cardiac muscle cell proliferation
GO:0060113 IEA inner ear receptor cell differentiation
GO:0070374 IEA positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034014 Fgf20-001 protein_coding Mus_musculus 0 811
ENSMUST00000118639 Fgf20-002 protein_coding Mus_musculus 0 462

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