C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000199764 CEACAM6-001 ENSG00000086548 9606 + 19:41755421-41772208 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartLiverLungMuscleOvaryTestisENST00000199764
Transcript ID Adipose Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000199764 2.013±0.00 41.470±41.41 22.020±0.00 0.026±0.00 0.209±0.00 60.953±49.21 0.016±0.00 31.162±22.30 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UJ CIL_0003UJ_0009 CGP 19:41673307-41761282
CIL_0003UJ CIL_0003UJ_000O CGP 19:41708612-41772208
CIL_0003UJ CIL_0003UJ_000B CGP 19:41750977-41811553

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044547 Ceacam2-201 protein_coding Mus_musculus 0 285
ENSMUST00000098666 Ceacam1-201 protein_coding Mus_musculus 0 272
ENSMUST00000098669 Ceacam1-203 protein_coding Mus_musculus 0 272

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