C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythrocyte membrane protein band 4.1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000202028 EPB41L1-013 ENSG00000088367 9606 + 20:36091504-36230341 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000202028
Transcript ID Adrenal Bladder Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000202028 2.492±0.00 1.556±0.00 1.561±0.00 2.706±0.00 0.985±0.64 2.754±2.19 0.894±0.75 7.278±5.65 5.396±0.77 1.730±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056R CIL_00056R_0001 CGP 20:35954564-36232799
CIL_0000WO CIL_0000WO_0001 CGP 20:36091504-36270918

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005198 IEA structural molecule activity
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 TAS plasma membrane
GO:0007268 TAS synaptic transmission
GO:0008092 IEA cytoskeletal protein binding
GO:0019898 IEA extrinsic component of membrane
GO:0030866 IEA cortical actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109577 Epb4.1l1-006 protein_coding Mus_musculus 0 2599
ENSMUST00000109574 Epb4.1l1-002 protein_coding Mus_musculus 0 1949
ENSMUST00000029155 Epb4.1l1-201 protein_coding Mus_musculus 0 1709
ENSMUST00000103135 Epb4.1l1-007 protein_coding Mus_musculus 0 1709
ENSMUST00000103136 Epb4.1l1-005 protein_coding Mus_musculus 0 1709
ENSMUST00000103137 Epb4.1l1-001 protein_coding Mus_musculus 0 1709
ENSMUST00000125153 Epb4.1l1-003 protein_coding Mus_musculus 0 1688
ENSMUST00000109572 Epb4.1l1-008 protein_coding Mus_musculus 0 1122
ENSMUST00000137067 Epb4.1l1-011 retained_intron Mus_musculus 0 865
ENSMUST00000144013 Epb4.1l1-010 processed_transcript Mus_musculus 0 767
ENSMUST00000129999 Epb4.1l1-012 processed_transcript Mus_musculus 0 577
ENSMUST00000141109 Epb4.1l1-009 processed_transcript Mus_musculus 0 538
ENSMUST00000142048 Epb4.1l1-004 processed_transcript Mus_musculus 0 538

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