C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCAAT/enhancer binding protein (C/EBP), epsilon
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000206513 CEBPE-001 ENSG00000092067 9606 - 14:23117304-23119616 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungOvaryPlacentaTestisENST00000206513
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000206513 0.668±0.00 0.423±0.00 0.025±0.00 0.022±0.00 0.020±0.00 0.065±0.00 0.386±0.00 0.054±0.02 0.240±0.07 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0006N2 CIL_0006N2_0001 CGP 14:23094765-23119616
CIL_0006MX CIL_0006MX_0001 CGP 14:23117304-23183674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006909 IEA phagocytosis
GO:0006952 TAS defense response
GO:0010628 IEA positive regulation of gene expression
GO:0030099 IEA myeloid cell differentiation
GO:0030225 IEA macrophage differentiation
GO:0042089 IEA cytokine biosynthetic process
GO:0042742 IEA defense response to bacterium
GO:0042803 IEA protein homodimerization activity
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0071222 IEA cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064290 Cebpe-201 protein_coding Mus_musculus 0 1109

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