C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aconitase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216254 ACO2-001 ENSG00000100412 9606 + 22:41469125-41528989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216254
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216254 26.608±0.00 20.580±0.00 16.185±0.00 41.199±17.94 25.413±19.28 16.744±2.64 98.823±68.79 29.729±22.33 11.447±3.82 11.516±7.08 93.444±38.10 17.980±10.38 33.254±3.01 23.285±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065P CIL_00065P_0001 CGP 22:41459717-41528989
CIL_00065O CIL_00065O_0001 CGP 22:41469125-41544606

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003994 IEA aconitate hydratase activity
GO:0005506 IDA iron ion binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006091 TAS generation of precursor metabolites and energy
GO:0006099 IEA tricarboxylic acid cycle
GO:0006101 IDA citrate metabolic process
GO:0006102 IEA isocitrate metabolic process
GO:0008152 IEA metabolic process
GO:0008219 IEA cell death
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051538 IEA 3 iron, 4 sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023116 Aco2-001 protein_coding Mus_musculus 0 3097
ENSMUST00000181698 Gm5421-001 processed_pseudogene Mus_musculus 0 2686
ENSMUST00000144324 Aco2-006 retained_intron Mus_musculus 0 726
ENSMUST00000126352 Aco2-004 retained_intron Mus_musculus 0 547
ENSMUST00000155704 Aco2-005 retained_intron Mus_musculus 0 420
ENSMUST00000135198 Aco2-003 retained_intron Mus_musculus 0 278
ENSMUST00000157003 Aco2-002 processed_transcript Mus_musculus 0 209

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