C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aconitase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023116 Aco2-001 ENSMUSG00000022477 10090 + 15:81872309-81915133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023116 220.371±68.92 220.338±29.26 87.275±1.99 146.783±62.14 298.217±123.40 178.332±20.34 775.883±41.02 399.948±10.73 68.232±14.04 94.159±15.08 497.271±15.04 119.198±10.17 81.568±17.52 55.267±4.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065P CIL_00065P_0002 CGP 15:81865319-81915133
CIL_00065O CIL_00065O_0002 CGP 15:81872309-81926213

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003994 IDA aconitate hydratase activity
GO:0005506 IEA iron ion binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006099 IEA tricarboxylic acid cycle
GO:0006101 IEA citrate metabolic process
GO:0006102 IEA isocitrate metabolic process
GO:0051538 IEA 3 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216254 ACO2-001 protein_coding Homo_sapiens 0 3097
ENST00000337566 POLR3H-007 protein_coding Homo_sapiens 5e-27 126
ENST00000355209 POLR3H-001 protein_coding Homo_sapiens 0 241
ENST00000396504 POLR3H-201 protein_coding Homo_sapiens 0 241
ENST00000396512 ACO2-002 protein_coding Homo_sapiens 0 1971
ENST00000431534 POLR3H-004 nonsense_mediated_decay Homo_sapiens 5e-27 126
ENST00000446607 RP4-764D2.1-001 processed_pseudogene Homo_sapiens 0 2289
ENST00000457251 RP1-101G11.2-001 processed_pseudogene Homo_sapiens 0 1700
ENST00000466237 ACO2-007 processed_transcript Homo_sapiens 0 588
ENST00000471094 ACO2-003 processed_transcript Homo_sapiens 0 433
ENST00000478010 ACO2-005 retained_intron Homo_sapiens 0 617
ENST00000481310 ACO2-006 processed_transcript Homo_sapiens 0 239
ENST00000482208 ACO2-004 retained_intron Homo_sapiens 0 381
ENST00000506543 RP11-524L6.2-001 processed_pseudogene Homo_sapiens 0 1005

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