C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, BED-type containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216268 ZBED4-001 ENSG00000100426 9606 + 22:49853842-49890078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216268
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216268 1.669±0.00 3.289±0.00 0.916±0.00 1.040±0.25 1.079±0.59 1.918±0.28 0.378±0.05 1.661±0.62 1.384±0.17 2.016±0.44 1.379±0.05 5.572±3.75 2.264±0.53 2.358±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IS CIL_0007IS_0001 CGP 22:49773283-49890078
CIL_000095 CIL_000095_0001 CGP 22:49853842-49918458

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0046872 IEA metal ion binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041297 Zbed4-001 protein_coding Mus_musculus 0 3037
ENSMUST00000116191 Gm15583-001 processed_pseudogene Mus_musculus 0 2721
ENSMUST00000187149 RP23-62J11.1-001 processed_pseudogene Mus_musculus 0 1945
ENSMUST00000187003 RP23-207H22.6-001 processed_pseudogene Mus_musculus 0 1882
ENSMUST00000186734 RP23-356O13.2-001 processed_pseudogene Mus_musculus 0 1744
ENSMUST00000131367 4930529C04Rik-001 processed_pseudogene Mus_musculus 0 1308

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