C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100425-ENSG00000100426 CGP 9606 22:49773283-49890078
GeneTranscriptPositionBiotype
ENSG00000100425 (BRD1)
bromodomain containing 1 		ENST00000216267 (BRD1-002) 49773283-49824804 protein_coding
ENST00000404034 (BRD1-001) 49773283-49825900 protein_coding
ENST00000404760 (BRD1-003) 49773283-49827512 protein_coding
ENST00000438393 (BRD1-004) 49773283-49823213 nonsense_mediated_decay
ENST00000457780 (BRD1-201) 49773293-49824804 protein_coding
ENST00000459821 (BRD1-005) 49818212-49823301 processed_transcript
ENST00000479985 (BRD1-007) 49775261-49776115 retained_intron
ENST00000494833 (BRD1-006) 49820833-49823205 processed_transcript
ENSG00000100426 (ZBED4)
zinc finger, BED-type containing 4 		ENST00000216268 (ZBED4-001) 49853842-49890078 protein_coding
ENSG00000229409 (RP11-494O16.3)
 ENST00000422315 (RP11-494O16.3-001) 49845929-49846090 processed_pseudogene
ENSG00000236867 (RP3-522J7.5)
 ENST00000444011 (RP3-522J7.5-001) 49817248-49817712 processed_pseudogene
ENSG00000260613 (RP3-522J7.6)
 ENST00000565177 (RP3-522J7.6-001) 49832616-49837786 lincRNA
ENSG00000277771 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000621807 (Metazoa_SRP.1-450) 49846456-49846720 misc_RNA
ENSG00000279345 (RP3-522J7.7)
 ENST00000624882 (RP3-522J7.7-001) 49805452-49807208 antisense
ENSG00000279494 (RP11-494O16.4)
 ENST00000624617 (RP11-494O16.4-001) 49851425-49853364 lincRNA
CIL_0007IS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022387-ENSMUSG00000034333 CGP 10090 15:88687300-88784516
GeneTranscriptPositionBiotype
ENSMUSG00000034333 (Zbed4)
zinc finger, BED domain containing 4 		ENSMUST00000041297 (Zbed4-001) 88751660-88784516 protein_coding
ENSMUST00000160975 (Zbed4-002) 88751760-88770876 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IS_0001ENSG00000100425ENST00000216267ENST00000404034ENST00000404760ENST00000438393ENST00000457780ENST00000459821ENST00000479985ENST00000494833ENSG00000100426ENST00000216268ENSG00000229409ENST00000422315ENSG00000236867ENST00000444011ENSG00000260613ENST00000565177ENSG00000277771ENST00000621807ENSG00000279345ENST00000624882ENSG00000279494ENST00000624617CIL_0007IS_0002ENSMUSG00000034333ENSMUST00000041297ENSMUST00000160975
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IS_0001ENSG00000100425ENST00000216267ENST00000404034ENST00000404760ENST00000438393ENST00000457780ENSG00000100426ENST00000216268ENSG00000229409ENST00000422315ENSG00000236867ENST00000444011ENSG00000260613ENST00000565177ENSG00000277771ENST00000621807ENSG00000279345ENST00000624882ENSG00000279494ENST00000624617CIL_0007IS_0002ENSMUSG00000034333ENSMUST00000041297
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100425 ENST00000216267 N/A N/A N/A N/A 0.537±0.00 N/A N/A N/A N/A N/A N/A 0.785±0.00 N/A N/A
ENST00000404034 N/A N/A N/A N/A 1.334±0.00 1.106±0.00 0.776±0.09 0.938±0.00 0.843±0.00 N/A N/A 1.867±0.00 N/A N/A
ENST00000404760 1.286±0.00 5.174±0.00 0.923±0.00 0.779±0.42 0.679±0.24 3.172±0.07 0.720±0.00 1.412±0.89 0.558±0.00 1.524±0.11 0.853±0.00 6.128±3.83 2.834±1.67 35.261±25.70
ENST00000438393 N/A 1.493±0.00 N/A 0.862±0.10 1.587±0.00 N/A N/A 1.473±0.98 1.524±0.27 2.379±0.00 1.079±0.26 N/A 1.519±0.34 6.267±0.00
ENST00000457780 N/A N/A 0.313±0.00 N/A N/A N/A N/A N/A 0.844±0.00 N/A N/A N/A N/A N/A
ENST00000459821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100426 ENST00000216268 1.669±0.00 3.289±0.00 0.916±0.00 1.040±0.25 1.079±0.59 1.918±0.28 0.378±0.05 1.661±0.62 1.384±0.17 2.016±0.44 1.379±0.05 5.572±3.75 2.264±0.53 2.358±0.21
ENSG00000229409 ENST00000422315 0.133±0.00 N/A N/A N/A N/A N/A 0.137±0.00 0.437±0.00 N/A N/A N/A 0.322±0.00 1.640±0.93 0.700±0.00
ENSG00000236867 ENST00000444011 N/A 0.363±0.00 N/A 0.459±0.00 0.898±0.00 0.416±0.00 0.065±0.00 N/A N/A N/A N/A 0.076±0.00 N/A 0.077±0.00
ENSG00000260613 ENST00000565177 0.015±0.00 N/A N/A 0.236±0.00 0.021±0.00 N/A 0.014±0.00 N/A 0.006±0.00 0.057±0.00 0.013±0.00 0.068±0.03 0.059±0.03 0.469±0.00
ENSG00000277771 ENST00000621807 N/A 0.056±0.00 N/A 0.063±0.00 0.056±0.00 0.052±0.00 N/A N/A 0.101±0.00 N/A N/A N/A N/A 0.422±0.00
ENSG00000279345 ENST00000624882 0.324±0.00 N/A 0.044±0.00 0.300±0.00 0.228±0.15 0.112±0.00 0.068±0.05 0.336±0.00 0.158±0.00 0.214±0.00 0.173±0.16 0.153±0.00 0.041±0.01 N/A
ENSG00000279494 ENST00000624617 N/A N/A N/A 0.196±0.00 0.306±0.00 0.150±0.00 0.072±0.00 0.220±0.00 0.038±0.00 0.226±0.00 0.084±0.00 0.059±0.01 N/A 0.637±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034333 ENSMUST00000041297 1.050±0.50 0.817±0.10 0.883±0.36 2.615±1.63 0.830±0.12 1.397±0.24 0.752±0.10 1.198±0.11 1.963±1.83 0.962±0.03 2.033±0.17 1.676±0.70 5.593±1.81 2.867±1.04
ENSMUST00000160975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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