C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosylhomocysteinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217426 AHCY-002 ENSG00000101444 9606 - 20:34280268-34303348 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217426
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217426 20.036±0.00 31.217±0.00 2.134±0.00 10.670±4.05 15.602±11.32 24.797±18.08 13.814±12.11 32.929±12.55 32.327±29.14 14.242±12.45 26.449±0.00 78.756±49.80 60.700±14.18 85.591±26.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0001 VISTA 20:33968769-34569610
CIL_0003SW CIL_0003SW_0001 CGP 20:34280268-34511393

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000096 TAS sulfur amino acid metabolic process
GO:0001666 IEA response to hypoxia
GO:0002439 IEA chronic inflammatory response to antigenic stimulus
GO:0004013 TAS:IEA adenosylhomocysteinase activity
GO:0004455 IEA ketol-acid reductoisomerase activity
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006730 IEA one-carbon metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0007584 IEA response to nutrient
GO:0008652 IEA cellular amino acid biosynthetic process
GO:0019510 IEA S-adenosylhomocysteine catabolic process
GO:0030554 IEA adenyl nucleotide binding
GO:0032259 TAS methylation
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042745 IEA circadian sleep/wake cycle
GO:0042802 IEA identical protein binding
GO:0043005 IEA neuron projection
GO:0044281 TAS small molecule metabolic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:0071268 IEA homocysteine biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054607 Ahcy-001 protein_coding Mus_musculus 0 1831
ENSMUST00000059524 Gm4737-201 protein_coding Mus_musculus 0 1808
ENSMUST00000029124 Gm9826-201 processed_pseudogene Mus_musculus 0 1735
ENSMUST00000118618 Gm5638-001 processed_pseudogene Mus_musculus 0 1312
ENSMUST00000117075 Gm4913-001 processed_pseudogene Mus_musculus 0 1188
ENSMUST00000146367 Ahcy-002 retained_intron Mus_musculus 0 289
ENSMUST00000137242 Ahcy-003 protein_coding Mus_musculus 0 285

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