C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, light chain 12A, regulatory, non-sarcomeric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217652 MYL12A-001 ENSG00000101608 9606 + 18:3247530-3256236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217652 133.091±0.00 139.560±0.00 12.670±0.00 8.036±2.60 67.622±35.60 52.858±18.35 37.309±16.78 23.212±0.07 76.446±43.87 60.510±0.00 99.171±34.85 84.538±9.27 37.765±19.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025P CIL_00025P_0002 CGP 18:3066807-3256236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IEA stress fiber
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0008360 IEA regulation of cell shape
GO:0016460 IEA myosin II complex
GO:0030018 IEA Z disc
GO:0035254 IEA glutamate receptor binding
GO:0043234 IEA protein complex
GO:0070062 IDA extracellular vesicular exosome
GO:0070527 IMP platelet aggregation
GO:0072661 IEA protein targeting to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148960 Myl12a-001 protein_coding Mus_musculus 0 673
ENSMUST00000024846 Myl12a-006 protein_coding Mus_musculus 0 656
ENSMUST00000038446 Myl12b-001 protein_coding Mus_musculus 0 582
ENSMUST00000123686 Myl12a-003 protein_coding Mus_musculus 0 568
ENSMUST00000121056 Gm6517-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000126529 Myl12a-002 retained_intron Mus_musculus 0 453
ENSMUST00000137537 Myl12b-003 retained_intron Mus_musculus 0 385
ENSMUST00000150456 Myl12a-004 protein_coding Mus_musculus 0 340

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