C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, light chain 12A, regulatory, non-sarcomeric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148960 Myl12a-001 ENSMUSG00000024048 10090 - 17:70993656-71002554 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000148960
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148960 44.985±8.55 8.107±1.39 7.436±4.62 20.253±7.56 24.506±5.87 21.704±0.00 27.150±2.93 16.925±16.84 63.277±9.02 15.209±2.95 41.542±25.40 33.271±5.38 6.106±3.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KY CIL_0006KY_0002 CGP 17:70993656-71126856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0008360 IMP regulation of cell shape
GO:0016460 IDA myosin II complex
GO:0030018 IDA Z disc
GO:0035254 IPI glutamate receptor binding
GO:0043234 IEA protein complex
GO:0070062 IEA extracellular vesicular exosome
GO:0070527 IEA platelet aggregation
GO:0072661 IMP protein targeting to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217652 MYL12A-001 protein_coding Homo_sapiens 0 673
ENST00000237500 MYL12B-001 protein_coding Homo_sapiens 0 588
ENST00000279022 MYL9-001 protein_coding Homo_sapiens 0 551
ENST00000346786 MYL9-002 protein_coding Homo_sapiens 0 226
ENST00000400175 MYL12B-003 protein_coding Homo_sapiens 0 588
ENST00000536605 MYL12A-201 protein_coding Homo_sapiens 0 658
ENST00000578562 MYL12A-008 protein_coding Homo_sapiens 0 368
ENST00000578611 MYL12A-004 protein_coding Homo_sapiens 0 627
ENST00000579226 MYL12A-002 protein_coding Homo_sapiens 0 645
ENST00000580887 MYL12A-005 protein_coding Homo_sapiens 0 658
ENST00000581193 MYL12B-002 protein_coding Homo_sapiens 0 588
ENST00000584539 MYL12B-004 protein_coding Homo_sapiens 0 588

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