C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family D (ALD), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000218104 ABCD1-001 ENSG00000101986 9606 + X:153724868-153744762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000218104
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000218104 12.539±0.00 5.313±0.00 0.661±0.00 0.997±0.88 5.650±4.62 2.256±1.84 2.066±1.56 2.571±1.61 2.685±1.50 1.548±0.88 6.036±4.19 4.819±3.24 9.096±3.70 8.782±6.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UW CIL_0001UW_0001 CGP X:153700497-153744762
CIL_0007GI CIL_0007GI_0002 CGP X:153724868-153779346

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 NAS transporter activity
GO:0005325 IGI peroxisomal fatty-acyl-CoA transporter activity
GO:0005515 IPI protein binding
GO:0005524 IDA:IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005779 IDA integral component of peroxisomal membrane
GO:0005829 TAS cytosol
GO:0006200 IEA ATP catabolic process
GO:0006635 IDA fatty acid beta-oxidation
GO:0006810 IEA transport
GO:0007031 NAS peroxisome organization
GO:0015910 IGI peroxisomal long-chain fatty acid import
GO:0015919 NAS peroxisomal membrane transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016887 IDA:IEA ATPase activity
GO:0019899 IPI enzyme binding
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0033559 TAS unsaturated fatty acid metabolic process
GO:0036109 TAS alpha-linolenic acid metabolic process
GO:0042626 NAS:IEA ATPase activity, coupled to transmembrane movement of substances
GO:0042758 IGI long-chain fatty acid catabolic process
GO:0042760 IGI very long-chain fatty acid catabolic process
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0043651 TAS linoleic acid metabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048471 IDA perinuclear region of cytoplasm
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002084 Abcd1-001 protein_coding Mus_musculus 0 2715
ENSMUST00000114461 Abcd1-002 protein_coding Mus_musculus 0 1847

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