C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 16 open reading frame 70
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000219139 C16orf70-001 ENSG00000125149 9606 + 16:67109988-67148539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENST00000219139
Transcript ID Brain Ovary
ENST00000219139 2.384±0.00 2.838±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0005T2 CIL_0005T2_0001 CGP 16:67029116-67148539
CIL_0003M3 CIL_0003M3_0002 CGP 16:67109958-67151214

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034361 D230025D16Rik-001 protein_coding Mus_musculus 0 2728
ENSMUST00000141957 D230025D16Rik-003 nonsense_mediated_decay Mus_musculus 0 1624
ENSMUST00000156561 D230025D16Rik-002 retained_intron Mus_musculus 0 1254
ENSMUST00000124113 D230025D16Rik-004 nonsense_mediated_decay Mus_musculus 0 1066
ENSMUST00000132964 D230025D16Rik-006 protein_coding Mus_musculus 0 521
ENSMUST00000133035 D230025D16Rik-005 retained_intron Mus_musculus 0 412
ENSMUST00000136822 B3gnt9-001 protein_coding Mus_musculus 0 392
ENSMUST00000093217 B3gnt9-201 protein_coding Mus_musculus 0 390

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