C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000219473 USP10-001 ENSG00000103194 9606 + 16:84699978-84779581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000219473
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000219473 2.456±0.00 2.353±0.00 2.152±0.00 1.937±0.00 0.520±0.00 4.700±0.00 1.712±0.00 4.047±2.77 4.405±0.00 1.464±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IC CIL_0000IC_0001 CGP 16:84648525-84779922

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002039 IPI p53 binding
GO:0004197 IMP cysteine-type endopeptidase activity
GO:0004221 IMP ubiquitin thiolesterase activity
GO:0004843 IMP ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005769 IDA early endosome
GO:0006281 IEA DNA repair
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006914 IEA autophagy
GO:0010506 IDA regulation of autophagy
GO:0016579 IMP protein deubiquitination
GO:0030330 IMP DNA damage response, signal transduction by p53 class mediator
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0044325 IDA ion channel binding
GO:0044822 IDA poly(A) RNA binding
GO:0045111 IDA intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108988 Usp10-001 protein_coding Mus_musculus 0 2004
ENSMUST00000144458 Usp10-002 protein_coding Mus_musculus 0 2004
ENSMUST00000143615 Usp10-004 processed_transcript Mus_musculus 0 1327
ENSMUST00000108982 Usp10-012 protein_coding Mus_musculus 0 529
ENSMUST00000135210 Usp10-003 processed_transcript Mus_musculus 0 379

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