C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MGA, MAX dimerization protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000219905 MGA-201 ENSG00000174197 9606 + 15:41660412-41769943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000219905
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000219905 1.012±0.00 1.535±0.00 1.656±0.00 2.137±0.00 0.481±0.00 5.027±0.00 3.329±0.00 0.333±0.00 4.440±0.00 0.221±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005F6 CIL_0005F6_0001 CGP 15:41557675-41773081
CIL_0005F7 CIL_0005F7_0001 CGP 15:41621224-41827855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110774 Mga-203 protein_coding Mus_musculus 0 10300
ENSMUST00000046717 Mga-001 protein_coding Mus_musculus 0 6549
ENSMUST00000079934 Mga-201 protein_coding Mus_musculus 0 5670
ENSMUST00000156510 Mga-002 protein_coding Mus_musculus 0 5585
ENSMUST00000110773 Mga-202 protein_coding Mus_musculus 0 3602
ENSMUST00000129405 Mga-003 processed_transcript Mus_musculus 0 2645
ENSMUST00000141776 Mga-004 retained_intron Mus_musculus 0 2429
ENSMUST00000122889 Mga-005 processed_transcript Mus_musculus 0 1565
ENSMUST00000138851 Mga-010 processed_transcript Mus_musculus 0 1489
ENSMUST00000150742 Mga-006 retained_intron Mus_musculus 0 902
ENSMUST00000132054 Mga-009 processed_transcript Mus_musculus 0 761
ENSMUST00000156074 Mga-007 processed_transcript Mus_musculus 0 737
ENSMUST00000152148 Mga-008 processed_transcript Mus_musculus 0 603
ENSMUST00000151074 Mga-011 processed_transcript Mus_musculus 0 544
ENSMUST00000131396 Mga-012 retained_intron Mus_musculus 0 505

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