C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005F6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000092445-ENSG00000174197 CGP 9606 15:41557675-41773081
GeneTranscriptPositionBiotype
ENSG00000092445 (TYRO3)
TYRO3 protein tyrosine kinase 		ENST00000263798 (TYRO3-001) 41559034-41583586 protein_coding
ENST00000559066 (TYRO3-002) 41557675-41578805 protein_coding
ENST00000559815 (TYRO3-006) 41567379-41570339 nonsense_mediated_decay
ENST00000559851 (TYRO3-008) 41571103-41573467 nonsense_mediated_decay
ENST00000560162 (TYRO3-007) 41570938-41573377 retained_intron
ENST00000560227 (TYRO3-005) 41564784-41568265 retained_intron
ENST00000560992 (TYRO3-003) 41559227-41562355 retained_intron
ENST00000568343 (TYRO3-010) 41570677-41577973 protein_coding
ENST00000568490 (TYRO3-011) 41577335-41579338 retained_intron
ENSG00000174197 (MGA)
MGA, MAX dimerization protein 		ENST00000219905 (MGA-201) 41660412-41769943 protein_coding
ENST00000545763 (MGA-202) 41660412-41769941 protein_coding
ENST00000561532 (MGA-008) 41669724-41684690 protein_coding
ENST00000563576 (MGA-002) 41621536-41713482 protein_coding
ENST00000564190 (MGA-003) 41734554-41762197 protein_coding
ENST00000566288 (MGA-006) 41748731-41752318 retained_intron
ENST00000566586 (MGA-001) 41668828-41773081 protein_coding
ENST00000566718 (MGA-004) 41660412-41713324 protein_coding
ENST00000568255 (MGA-009) 41760128-41762338 retained_intron
ENST00000568630 (MGA-007) 41621224-41696583 processed_transcript
ENST00000570161 (MGA-005) 41668895-41769941 protein_coding
ENST00000619521 (MGA-203) 41769940-41772986 protein_coding
ENSG00000260926 (RP11-380D11.2)
 ENST00000565259 (RP11-380D11.2-001) 41609466-41612727 lincRNA
ENST00000607505 (RP11-380D11.2-002) 41609544-41609924 lincRNA
ENSG00000270702 (RP11-107F6.4)
 ENST00000605661 (RP11-107F6.4-001) 41718370-41718672 processed_pseudogene
CIL_0005F6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027298-ENSMUSG00000033943 CGP 10090 2:119797733-119969581
GeneTranscriptPositionBiotype
ENSMUSG00000027298 (Tyro3)
TYRO3 protein tyrosine kinase 3 		ENSMUST00000028763 (Tyro3-002) 119799514-119818104 protein_coding
ENSMUST00000110783 (Tyro3-001) 119797733-119818104 protein_coding
ENSMUST00000130456 (Tyro3-007) 119803087-119807990 retained_intron
ENSMUST00000135726 (Tyro3-006) 119801116-119803293 processed_transcript
ENSMUST00000137135 (Tyro3-008) 119810846-119812391 retained_intron
ENSMUST00000147636 (Tyro3-004) 119799239-119805650 processed_transcript
ENSMUST00000147761 (Tyro3-003) 119809208-119818091 retained_intron
ENSMUST00000148343 (Tyro3-005) 119799327-119803335 processed_transcript
ENSMUSG00000033943 (Mga)
MAX gene associated 		ENSMUST00000046717 (Mga-001) 119897228-119967749 protein_coding
ENSMUST00000079934 (Mga-201) 119897228-119969581 protein_coding
ENSMUST00000110773 (Mga-202) 119897228-119969581 protein_coding
ENSMUST00000110774 (Mga-203) 119897228-119969581 protein_coding
ENSMUST00000122889 (Mga-005) 119958314-119965361 processed_transcript
ENSMUST00000129405 (Mga-003) 119897248-119926691 processed_transcript
ENSMUST00000131396 (Mga-012) 119960405-119962223 retained_intron
ENSMUST00000132054 (Mga-009) 119935188-119938751 processed_transcript
ENSMUST00000138851 (Mga-010) 119941251-119947202 processed_transcript
ENSMUST00000141776 (Mga-004) 119897232-119917950 retained_intron
ENSMUST00000150742 (Mga-006) 119921676-119924085 retained_intron
ENSMUST00000151074 (Mga-011) 119941755-119946995 processed_transcript
ENSMUST00000152148 (Mga-008) 119935452-119941541 processed_transcript
ENSMUST00000156074 (Mga-007) 119935357-119946460 processed_transcript
ENSMUST00000156510 (Mga-002) 119897305-119960794 protein_coding
ENSMUSG00000081056 (Gm13998)
predicted gene 13998 		ENSMUST00000120952 (Gm13998-001) 119878069-119878403 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005F6_0001ENSG00000092445ENST00000263798ENST00000559066ENST00000559815ENST00000559851ENST00000560162ENST00000560227ENST00000560992ENST00000568343ENST00000568490ENSG00000174197ENST00000219905ENST00000545763ENST00000561532ENST00000563576ENST00000564190ENST00000566288ENST00000566586ENST00000566718ENST00000568255ENST00000568630ENST00000570161ENST00000619521ENSG00000260926ENST00000565259ENST00000607505ENSG00000270702ENST00000605661CIL_0005F6_0002ENSMUSG00000027298ENSMUST00000028763ENSMUST00000110783ENSMUST00000130456ENSMUST00000135726ENSMUST00000137135ENSMUST00000147636ENSMUST00000147761ENSMUST00000148343ENSMUSG00000033943ENSMUST00000046717ENSMUST00000079934ENSMUST00000110773ENSMUST00000110774ENSMUST00000122889ENSMUST00000129405ENSMUST00000131396ENSMUST00000132054ENSMUST00000138851ENSMUST00000141776ENSMUST00000150742ENSMUST00000151074ENSMUST00000152148ENSMUST00000156074ENSMUST00000156510ENSMUSG00000081056ENSMUST00000120952
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005F6_0001ENSG00000092445ENST00000263798ENST00000559066ENST00000559851ENST00000560992ENST00000568343ENST00000568490ENSG00000174197ENST00000219905ENST00000545763ENST00000563576ENST00000564190ENST00000566586ENST00000566718ENST00000570161ENSG00000260926ENST00000565259ENST00000607505ENSG00000270702ENST00000605661CIL_0005F6_0002ENSMUSG00000027298ENSMUST00000028763ENSMUST00000110783ENSMUST00000147636ENSMUST00000147761ENSMUST00000148343ENSMUSG00000033943ENSMUST00000046717ENSMUST00000079934ENSMUST00000110773ENSMUST00000110774ENSMUST00000132054ENSMUST00000138851ENSMUST00000151074ENSMUST00000152148ENSMUST00000156510ENSMUSG00000081056ENSMUST00000120952
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092445 ENST00000263798 2.857±0.00 N/A 0.099±0.00 4.110±3.04 1.963±1.83 0.142±0.08 0.154±0.10 0.767±0.74 0.219±0.08 0.281±0.13 0.105±0.00 2.066±1.47 0.359±0.05 2.003±0.00
ENST00000559066 N/A N/A 0.378±0.00 6.659±0.83 5.152±0.00 0.343±0.17 0.455±0.00 2.119±2.05 0.466±0.00 0.696±0.30 0.105±0.03 9.046±11.44 3.455±1.78 5.149±0.52
ENST00000559815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.396±0.00 N/A
ENST00000560162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560992 N/A N/A N/A N/A N/A N/A N/A N/A 0.799±0.00 N/A N/A N/A N/A N/A
ENST00000568343 N/A N/A 1.852±0.00 21.706±0.00 1.513±0.00 1.734±0.52 0.836±0.00 4.607±4.35 1.857±0.00 N/A 1.687±0.00 N/A N/A N/A
ENST00000568490 4.212±0.00 0.834±0.00 0.716±0.00 14.811±0.34 6.365±5.08 1.171±0.68 0.478±0.05 4.356±4.12 0.451±0.00 2.616±0.00 0.271±0.00 14.958±9.84 4.185±1.58 15.375±2.48
ENSG00000174197 ENST00000219905 N/A N/A 1.012±0.00 1.535±0.00 1.656±0.00 2.137±0.00 0.481±0.00 N/A 5.027±0.00 3.329±0.00 0.333±0.00 4.440±0.00 0.221±0.00 N/A
ENST00000545763 1.359±0.00 0.840±0.00 0.933±0.00 0.373±0.00 2.134±0.00 1.468±0.41 1.125±0.37 1.097±0.00 0.157±0.00 1.760±0.00 0.342±0.00 1.834±1.12 0.490±0.31 2.339±1.00
ENST00000561532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563576 N/A N/A N/A 10.487±0.00 8.155±0.00 7.588±0.00 3.291±0.00 1.731±0.00 13.238±0.00 5.525±0.00 3.124±0.00 13.344±0.00 N/A N/A
ENST00000564190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.306±0.00 1.508±0.00 4.714±0.00
ENST00000566288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566586 N/A N/A 0.535±0.00 0.712±0.00 0.706±0.00 N/A 0.459±0.00 N/A N/A N/A N/A 1.725±0.00 1.044±0.00 0.796±0.00
ENST00000566718 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.741±0.00 N/A N/A N/A N/A
ENST00000568255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570161 0.396±0.00 0.420±0.00 N/A 1.503±0.09 0.893±0.00 0.511±0.00 0.239±0.00 0.995±0.15 0.288±0.00 0.749±0.00 0.864±0.20 N/A 0.356±0.01 N/A
ENST00000619521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260926 ENST00000565259 N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A 1.497±0.00
ENST00000607505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 N/A 5.425±0.00
ENSG00000270702 ENST00000605661 N/A 0.240±0.00 2.468±0.00 N/A 0.283±0.00 0.045±0.00 0.041±0.00 0.047±0.00 N/A 0.043±0.00 N/A 0.682±0.66 N/A 0.065±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027298 ENSMUST00000028763 1.765±1.66 1.450±0.36 16.216±3.32 10.663±1.52 1.144±0.19 4.173±1.00 0.209±0.07 0.517±0.34 0.143±0.15 4.531±2.45 0.112±0.04 7.753±3.51 2.969±1.37 7.681±3.62
ENSMUST00000110783 N/A 0.757±0.35 N/A N/A N/A 1.827±0.14 N/A N/A 0.087±0.02 N/A N/A 5.063±2.60 0.881±0.00 0.465±0.00
ENSMUST00000130456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147636 N/A N/A N/A N/A 2.185±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.02 N/A N/A 0.474±0.00
ENSMUST00000148343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 N/A N/A N/A
ENSMUSG00000033943 ENSMUST00000046717 1.288±0.60 0.705±0.14 1.491±0.08 3.347±0.56 1.085±0.24 0.471±0.20 0.895±0.09 0.851±0.15 0.858±0.61 1.600±0.24 1.687±0.32 2.484±2.25 4.258±1.92 0.955±0.46
ENSMUST00000079934 N/A N/A 0.609±0.00 N/A N/A N/A N/A N/A 0.254±0.00 N/A N/A N/A 0.660±0.00 N/A
ENSMUST00000110773 N/A N/A N/A N/A N/A N/A N/A N/A 0.256±0.00 N/A N/A N/A N/A N/A
ENSMUST00000110774 1.609±0.17 0.459±0.21 1.911±0.23 2.230±0.20 0.690±0.26 0.716±0.29 0.348±0.13 0.577±0.13 0.760±0.26 1.021±0.28 N/A 1.215±0.36 1.118±0.24 0.495±0.00
ENSMUST00000122889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132054 N/A 4.537±0.64 N/A N/A N/A 4.824±0.00 N/A N/A N/A N/A N/A 5.165±0.00 N/A N/A
ENSMUST00000138851 6.552±2.73 2.543±0.77 N/A N/A 6.209±1.90 2.729±0.92 2.917±0.30 3.511±0.63 2.036±0.55 6.586±0.60 N/A 7.288±2.45 N/A 4.136±0.63
ENSMUST00000141776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151074 N/A 3.659±0.20 N/A N/A N/A 3.771±0.52 N/A N/A N/A N/A N/A 7.883±0.00 N/A N/A
ENSMUST00000152148 N/A 3.762±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.935±0.00
ENSMUSG00000081056 ENSMUST00000120952 0.596±0.05 N/A N/A 0.157±0.00 0.745±0.00 0.426±0.00 0.380±0.27 0.205±0.03 0.172±0.13 N/A 0.195±0.00 1.060±0.69 N/A 0.239±0.08

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