C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyrroline-5-carboxylate reductase-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000220966 PYCRL-001 ENSG00000104524 9606 - 8:143603913-143609614 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000220966
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000220966 0.510±0.00 2.062±0.00 1.192±0.00 0.463±0.00 0.538±0.00 0.753±0.45 0.144±0.00 0.334±0.00 0.576±0.15 0.559±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0002GN CIL_0002GN_0001 CGP 8:143603913-143618048

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004735 IEA pyrroline-5-carboxylate reductase activity
GO:0005515 IEA protein binding
GO:0006561 IEA proline biosynthetic process
GO:0042802 IEA identical protein binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141645 Gabpb2-007 retained_intron Mus_musculus 0.00001 57

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