C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 130
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000221554 CCDC130-004 ENSG00000104957 9606 + 19:13747779-13763292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221554
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221554 2.475±0.00 8.089±0.00 3.780±2.73 5.707±0.00 4.314±0.00 3.693±0.00 6.287±0.00 3.720±0.00 10.597±0.00 12.731±0.00 11.306±6.11 9.658±3.53 14.622±3.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0009615 IEP response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098578 Ccdc130-001 protein_coding Mus_musculus 0 946
ENSMUST00000005120 Ccdc130-002 protein_coding Mus_musculus 0 726
ENSMUST00000164476 Ccdc130-003 retained_intron Mus_musculus 0 667
ENSMUST00000172320 Ccdc130-006 nonsense_mediated_decay Mus_musculus 0 665
ENSMUST00000166285 Ccdc130-007 retained_intron Mus_musculus 0 257
ENSMUST00000166728 Ccdc130-005 retained_intron Mus_musculus 5e-18 97
ENSMUST00000163993 Ccdc130-004 protein_coding Mus_musculus 0.0000000003 71

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