C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: programmed cell death 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000221784 PDCD5-010 ENSG00000105185 9606 + 19:32581202-32587425 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverMuscleOvaryPlacentaENST00000221784
Transcript ID Adipose Adrenal Brain Colon Liver Muscle Ovary Placenta
ENST00000221784 11.324±0.00 11.862±0.00 3.981±0.00 17.762±0.00 5.538±0.00 1.327±0.00 10.791±0.00 7.842±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118501 Pdcd5-001 protein_coding Mus_musculus 0 508
ENSMUST00000120714 Pdcd5-003 protein_coding Mus_musculus 0 424
ENSMUST00000126734 Pdcd5-006 retained_intron Mus_musculus 0 291
ENSMUST00000130306 Pdcd5-005 retained_intron Mus_musculus 0 220
ENSMUST00000127213 Pdcd5-004 retained_intron Mus_musculus 0 207
ENSMUST00000151336 Pdcd5-007 retained_intron Mus_musculus 2e-38 163

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