C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000225728 MED31-001 ENSG00000108590 9606 - 17:6643315-6651634 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyMuscleOvaryENST00000225728
Transcript ID Adrenal Brain Breast Colon Heart Kidney Muscle Ovary
ENST00000225728 3.141±0.00 5.873±0.28 1.953±0.00 2.004±0.00 1.659±0.66 2.600±0.64 1.038±0.00 4.274±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001B4 CIL_0001B4_0001 CGP 17:6578148-6644541
CIL_0000HF CIL_0000HF_0001 CGP 17:6640758-6651634

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006461 IEA protein complex assembly
GO:0010467 TAS gene expression
GO:0016592 IEA mediator complex
GO:0032403 IEA protein complex binding
GO:0048147 IEA negative regulation of fibroblast proliferation
GO:0060173 IEA limb development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021157 Med31-001 protein_coding Mus_musculus 0 588
ENSMUST00000129264 Med31-002 retained_intron Mus_musculus 0 346

Loading