C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ABI family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000225941 ABI3-001 ENSG00000108798 9606 + 17:49210227-49223225 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENST00000225941
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000225941 1.360±0.00 16.449±0.00 1.407±0.00 1.714±0.46 1.991±0.00 8.877±0.00 1.500±0.98 6.482±0.00 0.414±0.00 3.409±2.89 5.564±2.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MX CIL_0004MX_0002 CGP 17:49132460-49210574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005622 IDA intracellular
GO:0005737 IDA:IEA cytoplasm
GO:0006928 NAS cellular component movement
GO:0016020 IDA membrane
GO:0030027 IDA lamellipodium
GO:0030334 IDA regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059026 Abi3-001 protein_coding Mus_musculus 0 1175
ENSMUST00000131049 Abi3-002 processed_transcript Mus_musculus 0 859
ENSMUST00000133070 Zfp652-003 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000143492 Abi3-004 processed_transcript Mus_musculus 1.99965e-42 178

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