C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000225969 MRPL27-001 ENSG00000108826 9606 - 17:50367867-50373214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000225969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000225969 19.808±0.00 28.429±0.00 2.897±0.00 10.979±8.16 18.732±15.67 17.683±13.26 17.299±14.05 25.908±20.15 22.128±17.96 10.915±7.37 22.607±12.18 31.547±17.99 50.632±22.55 24.217±15.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005762 NAS mitochondrial large ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 IEA:NAS translation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025278 Mrpl27-001 protein_coding Mus_musculus 0 479
ENSMUST00000132813 Mrpl27-002 processed_transcript Mus_musculus 0 457
ENSMUST00000096579 Gm6304-201 processed_pseudogene Mus_musculus 0 416
ENSMUST00000117881 Gm12774-001 processed_pseudogene Mus_musculus 4.00001e-40 169

Loading