C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ZPR1 zinc finger
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000227322 ZPR1-001 ENSG00000109917 9606 - 11:116777720-116788050 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000227322
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000227322 9.585±0.00 13.782±0.00 0.729±0.00 5.203±1.18 1.238±0.71 9.175±0.00 1.344±0.77 2.610±0.68 5.159±0.00 8.604±0.00 2.335±0.00 7.899±3.58 8.501±0.86 15.127±1.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EK CIL_0008EK_0001 VISTA 11:116351165-116951910
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 ISS microtubule cytoskeleton organization
GO:0001833 IEA inner cell mass cell proliferation
GO:0001834 ISS trophectodermal cell proliferation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006397 IEA mRNA processing
GO:0007165 TAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0008283 TAS cell proliferation
GO:0008380 IEA RNA splicing
GO:0010628 IMP positive regulation of gene expression
GO:0015030 IDA Cajal body
GO:0021510 ISS spinal cord development
GO:0030424 ISS axon
GO:0030426 ISS growth cone
GO:0030576 ISS Cajal body organization
GO:0030971 IEA receptor tyrosine kinase binding
GO:0031369 IPI translation initiation factor binding
GO:0031641 ISS regulation of myelination
GO:0032797 IDA SMN complex
GO:0033120 IMP positive regulation of RNA splicing
GO:0042023 ISS DNA endoreduplication
GO:0042307 IDA positive regulation of protein import into nucleus
GO:0043025 ISS neuronal cell body
GO:0043204 ISS perikaryon
GO:0045927 ISS positive regulation of growth
GO:0061564 ISS axon development
GO:0071364 IDA cellular response to epidermal growth factor stimulus
GO:0071931 IMP positive regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0097504 IDA Gemini of coiled bodies
GO:1902742 ISS apoptotic process involved in development
GO:1990261 IMP pre-mRNA catabolic process
GO:2000672 ISS negative regulation of motor neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156440 Zpr1-001 protein_coding Mus_musculus 0 1592
ENSMUST00000034583 Zpr1-003 protein_coding Mus_musculus 0 1219
ENSMUST00000114552 Zpr1-004 protein_coding Mus_musculus 0 822
ENSMUST00000125239 Zpr1-008 nonsense_mediated_decay Mus_musculus 0 484

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