C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ZPR1 zinc finger
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156440 Zpr1-001 ENSMUSG00000032078 10090 + 9:46273064-46282643 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000156440
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000156440 2.515±1.20 3.452±0.25 3.450±0.44 5.711±2.13 2.432±0.95 3.805±0.65 1.093±0.39 2.520±0.79 4.942±1.11 2.896±1.33 1.650±0.31 8.345±3.89 4.363±1.03 6.299±3.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546
CIL_0008EK CIL_0008EK_0002 VISTA 9:46081147-46681838

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0001833 IMP inner cell mass cell proliferation
GO:0001834 IMP trophectodermal cell proliferation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 ISS nucleoplasm
GO:0005730 ISS nucleolus
GO:0005737 IDA cytoplasm
GO:0006397 IEA mRNA processing
GO:0008270 IDA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0010628 IMP positive regulation of gene expression
GO:0015030 ISS Cajal body
GO:0021510 IMP spinal cord development
GO:0030424 IDA axon
GO:0030426 IDA growth cone
GO:0030576 IMP Cajal body organization
GO:0030971 IPI receptor tyrosine kinase binding
GO:0031369 IPI translation initiation factor binding
GO:0031641 IMP regulation of myelination
GO:0032797 ISS SMN complex
GO:0033120 ISS positive regulation of RNA splicing
GO:0042023 IMP DNA endoreduplication
GO:0042307 ISS positive regulation of protein import into nucleus
GO:0043025 IDA neuronal cell body
GO:0043204 IDA perikaryon
GO:0045927 IMP positive regulation of growth
GO:0061564 IMP axon development
GO:0071364 ISS cellular response to epidermal growth factor stimulus
GO:0071931 ISS positive regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0097504 ISS Gemini of coiled bodies
GO:1902742 IMP apoptotic process involved in development
GO:1990261 ISS pre-mRNA catabolic process
GO:2000672 IMP negative regulation of motor neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000227322 ZPR1-001 protein_coding Homo_sapiens 0 1592
ENST00000407656 ZNF259P1-001 transcribed_processed_pseudogene Homo_sapiens 0 1332
ENST00000425791 ZPR1-004 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000429220 ZPR1-003 protein_coding Homo_sapiens 0 822
ENST00000431973 ZPR1-006 nonsense_mediated_decay Homo_sapiens 0 488
ENST00000444935 ZPR1-002 protein_coding Homo_sapiens 0 1219
ENST00000449430 ZPR1-005 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000487030 ZPR1-007 retained_intron Homo_sapiens 0 265
ENST00000572422 ZNF259P1-002 processed_transcript Homo_sapiens 0 1336

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