C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: anti-silencing function 1A histone chaperone
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000229595 ASF1A-001 ENSG00000111875 9606 + 6:118894220-118909167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229595
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229595 2.752±0.00 5.633±0.00 5.385±0.41 5.390±0.21 3.899±0.07 3.430±0.71 4.339±1.23 3.237±0.42 3.972±0.34 2.278±0.12 5.724±1.60 3.382±0.39 8.350±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OT CIL_0005OT_0001 CGP 6:118813442-118935162
CIL_0005OS CIL_0005OS_0001 CGP 6:118894220-119149387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0001649 IEA osteoblast differentiation
GO:0003682 NAS chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006281 IDA DNA repair
GO:0006333 IEA chromatin assembly or disassembly
GO:0006334 IDA nucleosome assembly
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0031936 NAS negative regulation of chromatin silencing
GO:0042393 IDA histone binding
GO:0042692 IEA muscle cell differentiation
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020004 Asf1a-201 protein_coding Mus_musculus 0 1622

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