C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/threonine kinase 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000229812 STK38-001 ENSG00000112079 9606 - 6:36493892-36547470 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229812
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229812 10.458±0.00 6.407±0.00 0.343±0.17 10.870±0.00 5.208±0.81 4.067±2.96 4.809±2.60 4.935±0.63 5.341±0.00 2.348±1.21 13.983±8.48 12.413±3.63 8.668±1.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YA CIL_0002YA_0001 CGP 6:36442767-36547470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0004672 IEA protein kinase activity
GO:0004674 IDA:IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IDA:IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006464 IDA cellular protein modification process
GO:0006468 IDA:IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0031435 IPI mitogen-activated protein kinase kinase kinase binding
GO:0035556 IDA intracellular signal transduction
GO:0043407 IDA negative regulation of MAP kinase activity
GO:0070688 IDA MLL5-L complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009138 Stk38-001 protein_coding Mus_musculus 0 2200
ENSMUST00000119274 Stk38-002 protein_coding Mus_musculus 0 2163
ENSMUST00000141431 Stk38-009 retained_intron Mus_musculus 0 1064
ENSMUST00000126893 Stk38-003 processed_transcript Mus_musculus 0 1014
ENSMUST00000144299 Stk38-008 retained_intron Mus_musculus 0 937
ENSMUST00000144516 Stk38-006 retained_intron Mus_musculus 0 647
ENSMUST00000140355 Stk38-013 processed_transcript Mus_musculus 0 628
ENSMUST00000125070 Stk38-010 processed_transcript Mus_musculus 0 625
ENSMUST00000142923 Stk38-011 processed_transcript Mus_musculus 0 553
ENSMUST00000156732 Stk38-015 processed_transcript Mus_musculus 0 261
ENSMUST00000126619 Stk38-012 processed_transcript Mus_musculus 0 255
ENSMUST00000145298 Stk38-004 processed_transcript Mus_musculus 0 244
ENSMUST00000142366 Stk38-005 processed_transcript Mus_musculus 0 241
ENSMUST00000126671 Stk38-014 processed_transcript Mus_musculus 0 198
ENSDART00000144693 si:rp71-45g20.7-001 unprocessed_pseudogene Danio_rerio 0.0000000006 71
ENSDART00000137613 si:rp71-45g20.5-001 unprocessed_pseudogene Danio_rerio 0.0000000006 71
ENSDART00000122591 ROCK2 (4 of 9)-201 protein_coding Danio_rerio 0.00000003 66
ENSDART00000122163 ROCK2 (7 of 9)-201 protein_coding Danio_rerio 0.00000003 66
ENSDART00000002777 rock2b-201 protein_coding Danio_rerio 0.00000003 66
ENSDART00000153420 rock2b-004 processed_transcript Danio_rerio 0.00000003 66
ENSDART00000078593 ROCK2 (3 of 9)-201 protein_coding Danio_rerio 0.00000003 66
ENSDART00000124699 ROCK2 (6 of 9)-201 protein_coding Danio_rerio 0.00000003 66
ENSDART00000128578 ROCK2 (9 of 9)-201 protein_coding Danio_rerio 0.00000003 66

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