C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and FYVE domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000233055 WDFY1-001 ENSG00000085449 9606 - 2:223875347-223945387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000233055
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000233055 13.552±0.00 7.090±0.00 3.904±0.00 6.353±1.96 6.203±1.08 7.139±0.08 2.595±0.41 4.881±3.20 3.536±0.42 8.231±2.84 2.409±1.31 9.327±2.67 5.613±2.11 7.610±3.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XJ CIL_0006XJ_0001 CGP 2:223751686-223945387
CIL_0006XI CIL_0006XI_0001 CGP 2:223855716-223967714

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005545 IDA 1-phosphatidylinositol binding
GO:0005634 IDA nucleus
GO:0005769 IDA early endosome
GO:0005829 IDA cytosol
GO:0008150 ND biological_process
GO:0008270 NAS zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113514 Wdfy1-009 protein_coding Mus_musculus 0 1592
ENSMUST00000113515 Wdfy1-008 protein_coding Mus_musculus 0 1592
ENSMUST00000113513 Wdfy1-003 protein_coding Mus_musculus 0 1592
ENSMUST00000113512 Wdfy1-001 protein_coding Mus_musculus 0 1592
ENSMUST00000187005 Wdfy1-013 nonsense_mediated_decay Mus_musculus 0 1020
ENSMUST00000143368 Wdfy1-005 protein_coding Mus_musculus 0 721
ENSMUST00000048820 Wdfy1-002 protein_coding Mus_musculus 0 676
ENSMUST00000113511 Wdfy1-012 protein_coding Mus_musculus 0 676
ENSMUST00000113510 Wdfy1-011 protein_coding Mus_musculus 0 676
ENSMUST00000186464 Wdfy1-014 retained_intron Mus_musculus 0 412
ENSMUST00000125641 Wdfy1-004 protein_coding Mus_musculus 0 353
ENSMUST00000138319 Wdfy1-006 processed_transcript Mus_musculus 0 228
ENSMUST00000130714 Wdfy1-010 processed_transcript Mus_musculus 0 228
ENSMUST00000127771 Wdfy1-007 processed_transcript Mus_musculus 0 228

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