C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: insulin-like growth factor binding protein 2, 36kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000233809 IGFBP2-001 ENSG00000115457 9606 + 2:216633395-216664436 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000233809
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000233809 55.137±0.00 22.596±0.00 2.179±0.00 10.575±10.15 24.714±18.89 54.323±51.14 17.949±14.81 88.301±38.46 189.917±186.24 43.268±41.14 6.563±0.00 121.662±99.99 153.347±35.10 89.214±26.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MF CIL_0005MF_0001 CGP 2:216498189-216664436
CIL_0000AM CIL_0000AM_0002 CGP 2:216632828-216695525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 IEA regulation of cell growth
GO:0005515 IPI protein binding
GO:0005520 IEA insulin-like growth factor binding
GO:0005576 ISS:IEA extracellular region
GO:0005615 IDA extracellular space
GO:0007165 IEA signal transduction
GO:0007565 IEA female pregnancy
GO:0007568 IEA aging
GO:0007584 IEA response to nutrient
GO:0009612 IEA response to mechanical stimulus
GO:0010226 IEA response to lithium ion
GO:0016324 IEA apical plasma membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0031994 IDA insulin-like growth factor I binding
GO:0031995 ISS insulin-like growth factor II binding
GO:0032355 IEA response to estradiol
GO:0032526 IEA response to retinoic acid
GO:0032870 IEA cellular response to hormone stimulus
GO:0042104 IDA positive regulation of activated T cell proliferation
GO:0042493 IEA response to drug
GO:0043567 ISS regulation of insulin-like growth factor receptor signaling pathway
GO:0043627 IEA response to estrogen
GO:0044267 TAS cellular protein metabolic process
GO:0048545 IEA response to steroid hormone
GO:0051384 IEA response to glucocorticoid
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047328 Igfbp2-001 protein_coding Mus_musculus 0 950
ENSMUST00000120564 Igfbp2-002 protein_coding Mus_musculus 0 765
ENSMUST00000155703 Igfbp2-003 retained_intron Mus_musculus 0 654

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