C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000235307 C1orf21-001 ENSG00000116667 9606 + 1:184387058-184629020 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000235307
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000235307 3.874±0.00 2.412±0.00 0.683±0.00 4.908±2.37 2.805±0.32 3.013±1.11 3.958±2.52 1.854±0.21 2.381±0.84 4.738±0.00 7.257±2.68 3.377±1.90 1.372±0.20 2.499±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BM CIL_0001BM_0002 CGP 1:184051677-184629020

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044581 1700025G04Rik-001 protein_coding Mus_musculus 0 1110
ENSMUST00000187603 1700025G04Rik-004 nonsense_mediated_decay Mus_musculus 0 797
ENSMUST00000128433 1700025G04Rik-002 retained_intron Mus_musculus 0 481
ENSMUST00000121533 1700025G04Rik-003 nonsense_mediated_decay Mus_musculus 0 436

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