C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069280-ENSDARG00000029292 CGP 7955 2:9735018-9760625
GeneTranscriptPositionBiotype
ENSDARG00000029292 (C2H1orf21)
chromosome 1 open reading frame 21 		ENSDART00000048655 (C2H1orf21-001) 9746978-9760548 protein_coding
ENSDART00000063281 (C2H1orf21-201) 9746981-9760548 protein_coding
ENSDART00000131613 (C2H1orf21-002) 9746978-9760625 protein_coding
ENSDART00000137924 (C2H1orf21-003) 9747957-9760506 protein_coding
ENSDARG00000030108 (sec22ba)
SEC22 vesicle trafficking protein homolog B (S. cerevisiae), a 		ENSDART00000043499 (sec22ba-001) 9762584-9772558 protein_coding
ENSDART00000153063 (sec22ba-002) 9759839-9771857 protein_coding
ENSDART00000153323 (sec22ba-003) 9762778-9771850 nonsense_mediated_decay
ENSDARG00000069280 (tsen15)
tRNA splicing endonuclease 15 homolog (S. cerevisiae) 		ENSDART00000100696 (tsen15-001) 9735018-9746702 protein_coding
CIL_0001BM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198860-ENSG00000116667 CGP 9606 1:184051677-184629020
GeneTranscriptPositionBiotype
ENSG00000116667 (C1orf21)
chromosome 1 open reading frame 21 		ENST00000235307 (C1orf21-001) 184387058-184629020 protein_coding
ENST00000367514 (C1orf21-003) 184568399-184619936 processed_transcript
ENST00000477517 (C1orf21-004) 184590748-184599609 processed_transcript
ENST00000489143 (C1orf21-002) 184539993-184592248 processed_transcript
ENSG00000198860 (TSEN15)
TSEN15 tRNA splicing endonuclease subunit 		ENST00000361641 (TSEN15-001) 184051677-184074212 protein_coding
ENST00000367518 (TSEN15-005) 184051733-184070812 retained_intron
ENST00000423085 (TSEN15-006) 184051746-184074206 protein_coding
ENST00000457455 (TSEN15-004) 184054361-184055069 retained_intron
ENST00000462677 (TSEN15-003) 184051760-184073846 nonsense_mediated_decay
ENST00000485209 (TSEN15-002) 184051679-184072980 nonsense_mediated_decay
ENST00000533373 (TSEN15-007) 184051726-184073023 protein_coding
ENSG00000230470 (GS1-115G20.1)
 ENST00000414377 (GS1-115G20.1-001) 184408337-184412360 sense_intronic
ENSG00000232036 (GS1-115G20.2)
 ENST00000245811 (GS1-115G20.2-001) 184566511-184567835 processed_pseudogene
ENSG00000244568 (RN7SL654P)
RNA, 7SL, cytoplasmic 654, pseudogene 		ENST00000479178 (RN7SL654P-201) 184335658-184335949 misc_RNA
ENSG00000271387 (RP11-382D12.2)
 ENST00000605589 (RP11-382D12.2-001) 184385753-184386704 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BM_0001ENSDARG00000029292ENSDART00000048655ENSDART00000063281ENSDART00000131613ENSDART00000137924ENSDARG00000030108ENSDART00000043499ENSDART00000153063ENSDART00000153323ENSDARG00000069280ENSDART00000100696CIL_0001BM_0002ENSG00000116667ENST00000235307ENST00000367514ENST00000477517ENST00000489143ENSG00000198860ENST00000361641ENST00000367518ENST00000423085ENST00000457455ENST00000462677ENST00000485209ENST00000533373ENSG00000230470ENST00000414377ENSG00000232036ENST00000245811ENSG00000244568ENST00000479178ENSG00000271387ENST00000605589
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BM_0001ENSDARG00000029292ENSDART00000048655ENSDART00000063281ENSDART00000131613ENSDARG00000030108ENSDART00000043499ENSDART00000153063ENSDART00000153323ENSDARG00000069280ENSDART00000100696CIL_0001BM_0002ENSG00000116667ENST00000235307ENST00000367514ENSG00000198860ENST00000361641ENST00000423085ENST00000457455ENST00000533373ENSG00000230470ENST00000414377ENSG00000232036ENST00000245811ENSG00000244568ENST00000479178ENSG00000271387ENST00000605589
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029292 ENSDART00000048655 N/A N/A N/A 15.123±8.87 N/A N/A N/A 15.113±0.00 N/A N/A 1.132±0.00 N/A N/A N/A
ENSDART00000063281 N/A N/A N/A 6.094±0.06 N/A N/A 9.528±2.25 4.041±0.00 N/A N/A 1.373±0.00 N/A N/A N/A
ENSDART00000131613 N/A N/A N/A 24.534±8.58 N/A N/A 13.453±6.64 12.691±0.00 0.651±0.00 N/A 0.563±0.00 N/A N/A N/A
ENSDART00000137924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000030108 ENSDART00000043499 N/A N/A N/A 4.528±2.41 N/A N/A 7.916±3.36 7.007±0.59 0.844±0.00 N/A 5.306±0.00 N/A N/A N/A
ENSDART00000153063 N/A N/A N/A N/A N/A N/A N/A 7.269±0.00 1.216±0.00 N/A 1.644±0.00 N/A N/A N/A
ENSDART00000153323 N/A N/A N/A N/A N/A N/A 3.870±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069280 ENSDART00000100696 N/A N/A N/A 1.643±1.07 N/A N/A 3.180±4.71 0.722±0.42 0.426±0.00 N/A 0.669±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116667 ENST00000235307 3.874±0.00 2.412±0.00 0.683±0.00 4.908±2.37 2.805±0.32 3.013±1.11 3.958±2.52 1.854±0.21 2.381±0.84 4.738±0.00 7.257±2.68 3.377±1.90 1.372±0.20 2.499±0.90
ENST00000367514 21.461±0.00 8.192±0.00 N/A N/A 11.923±0.00 38.542±0.00 10.829±6.80 8.950±1.65 7.871±0.00 22.507±0.00 42.459±0.00 14.735±9.96 7.423±1.92 18.068±0.00
ENST00000477517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198860 ENST00000361641 1.976±0.00 4.425±0.00 N/A 3.295±0.31 3.260±0.50 4.004±0.00 2.463±1.63 2.320±0.75 1.567±1.06 1.602±0.00 1.904±0.65 3.538±1.45 4.753±1.11 4.747±3.07
ENST00000367518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423085 2.732±0.00 3.640±0.00 N/A 3.202±2.23 2.372±0.00 1.881±0.46 0.738±0.00 2.548±0.00 0.693±0.00 0.970±0.36 2.352±0.00 4.674±0.68 2.825±0.40 2.597±0.45
ENST00000457455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.274±0.00 N/A N/A N/A
ENST00000462677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533373 N/A N/A N/A N/A N/A N/A 2.878±0.00 3.638±0.00 2.637±0.21 N/A N/A N/A N/A N/A
ENSG00000230470 ENST00000414377 0.132±0.00 0.126±0.00 N/A 0.507±0.00 0.178±0.01 N/A 0.441±0.42 N/A N/A 0.540±0.00 0.181±0.00 0.159±0.00 N/A 0.187±0.03
ENSG00000232036 ENST00000245811 0.030±0.00 0.010±0.00 0.045±0.00 0.191±0.18 0.928±0.00 0.991±0.00 0.058±0.02 N/A 0.946±0.00 0.202±0.17 1.480±0.00 0.050±0.02 N/A 0.077±0.00
ENSG00000244568 ENST00000479178 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A
ENSG00000271387 ENST00000605589 0.134±0.00 0.136±0.00 N/A 0.333±0.00 N/A 0.128±0.00 N/A N/A N/A 0.145±0.00 N/A 0.383±0.14 0.054±0.00 0.227±0.06

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