C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, light chain 12B, regulatory
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000237500 MYL12B-001 ENSG00000118680 9606 + 18:3261909-3278284 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000237500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000237500 132.812±0.00 206.050±0.00 13.643±0.00 55.928±20.03 92.305±56.69 77.349±37.91 41.073±30.50 139.512±111.99 59.104±38.28 164.443±124.76 42.183±17.36 209.682±104.17 279.365±38.23 126.400±31.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006936 TAS muscle contraction
GO:0007411 TAS axon guidance
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038446 Myl12b-001 protein_coding Mus_musculus 0 654
ENSMUST00000123686 Myl12a-003 protein_coding Mus_musculus 0 588
ENSMUST00000024846 Myl12a-006 protein_coding Mus_musculus 0 588
ENSMUST00000148960 Myl12a-001 protein_coding Mus_musculus 0 588
ENSMUST00000121056 Gm6517-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000150456 Myl12a-004 protein_coding Mus_musculus 0 363
ENSMUST00000131820 Myl12b-002 retained_intron Mus_musculus 0 246
ENSMUST00000128179 Myl12a-005 protein_coding Mus_musculus 0 230
ENSMUST00000129093 Myl12a-007 retained_intron Mus_musculus 0 230
ENSMUST00000126529 Myl12a-002 retained_intron Mus_musculus 0 230

Loading