C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, galactoside-binding-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000238875 LGALSL-001 ENSG00000119862 9606 + 2:64454092-64461381 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLungMusclePlacentaENST00000238875
Transcript ID Brain Breast Heart Lung Muscle Placenta
ENST00000238875 0.575±0.00 0.606±0.00 2.529±0.00 3.726±0.00 6.999±0.00 1.389±0.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IDA intracellular
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047028 Lgalsl-001 protein_coding Mus_musculus 0 817
ENSMUST00000144441 Lgalsl-003 processed_transcript Mus_musculus 0 689
ENSMUST00000053926 Pick1-003 protein_coding Mus_musculus 0 608
ENSMUST00000170221 Gm17209-001 transcribed_processed_pseudogene Mus_musculus 0 514
ENSMUST00000032775 Lrrc28-002 protein_coding Mus_musculus 0 464
ENSMUST00000154300 Lgalsl-002 processed_transcript Mus_musculus 0 401
ENSMUST00000056639 Gm5065-001 protein_coding Mus_musculus 0 324
ENSMUST00000132928 Lgalsl-004 processed_transcript Mus_musculus 0 291
ENSMUST00000191386 Lrrc28-009 processed_transcript Mus_musculus 0 204

Loading