C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine rich repeat containing 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032775 Lrrc28-002 ENSMUSG00000030556 10090 - 7:67594399-67645207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENSMUST00000032775
Transcript ID Liver Ovary
ENSMUST00000032775 0.642±0.07 0.646±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238875 LGALSL-001 protein_coding Homo_sapiens 0 464
ENST00000301981 LRRC28-001 protein_coding Homo_sapiens 0 575
ENST00000331450 LRRC28-002 protein_coding Homo_sapiens 0 350
ENST00000409537 LGALSL-003 protein_coding Homo_sapiens 0 464
ENST00000447360 LRRC28-003 protein_coding Homo_sapiens 0 575
ENST00000558172 LRRC28-010 protein_coding Homo_sapiens 0 272
ENST00000558471 LRRC28-009 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000558500 LRRC28-020 processed_transcript Homo_sapiens 0 573
ENST00000558861 LRRC28-007 protein_coding Homo_sapiens 0 575
ENST00000558879 LRRC28-008 protein_coding Homo_sapiens 0 272
ENST00000559399 LRRC28-017 processed_transcript Homo_sapiens 0 577
ENST00000559433 LRRC28-021 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000560213 LRRC28-005 retained_intron Homo_sapiens 0 272
ENST00000561253 LRRC28-022 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000561276 LRRC28-006 protein_coding Homo_sapiens 0 305
ENST00000603662 RP11-130N24.2-001 processed_pseudogene Homo_sapiens 0 207

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