C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ALG5, dolichyl-phosphate beta-glucosyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000239891 ALG5-001 ENSG00000120697 9606 - 13:36949830-36999367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000239891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000239891 9.931±0.00 19.251±0.00 1.247±0.00 4.734±2.18 10.539±6.29 5.008±2.75 2.892±1.84 10.119±6.45 14.477±11.55 5.605±2.68 6.762±0.00 20.727±11.65 18.242±4.67 13.205±3.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PF CIL_0000PF_0002 CGP 13:36844831-37000261
CIL_0000PE CIL_0000PE_0002 CGP 13:36949775-37009613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004576 TAS oligosaccharyl transferase activity
GO:0004581 IEA dolichyl-phosphate beta-glucosyltransferase activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006486 TAS protein glycosylation
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0007368 IEA determination of left/right symmetry
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044567 Alg5-001 protein_coding Mus_musculus 0 1083
ENSMUST00000141191 Alg5-002 nonsense_mediated_decay Mus_musculus 0 1070
ENSMUST00000155273 Alg5-003 nonsense_mediated_decay Mus_musculus 0 652
ENSMUST00000143387 Alg5-004 retained_intron Mus_musculus 0 283

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