C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, alpha 3, 46kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000241125 GJA3-001 ENSG00000121743 9606 - 13:20138255-20161049 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000241125
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000241125 0.071±0.00 0.071±0.00 0.007±0.00 0.025±0.02 0.010±0.00 4.309±0.00 0.663±0.00 0.023±0.00 0.024±0.00 0.058±0.03 0.723±0.23 1.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SK CIL_0003SK_0001 CGP 13:20138255-20192898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005243 IEA gap junction channel activity
GO:0005886 IEA plasma membrane
GO:0005921 IEA gap junction
GO:0005922 IEA connexon complex
GO:0006810 NAS transport
GO:0007267 TAS cell-cell signaling
GO:0007601 TAS visual perception
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061614 Gja3-201 protein_coding Mus_musculus 0 745
ENSDART00000145627 gja3-001 protein_coding Danio_rerio 0 350
ENSDART00000047272 cx43-201 protein_coding Danio_rerio 2e-16 94
ENSDART00000138569 cx43-002 protein_coding Danio_rerio 2e-16 94
ENSDART00000061261 cx43-001 protein_coding Danio_rerio 2e-16 94
ENSDART00000061256 cx28.9-001 protein_coding Danio_rerio 0.0000000000001 84
ENSDART00000153151 cx43-003 protein_coding Danio_rerio 0.00000000002 77

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