C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003SK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000121743-ENSG00000165474 CGP 9606 13:20138255-20192898
GeneTranscriptPositionBiotype
ENSG00000121743 (GJA3)
gap junction protein, alpha 3, 46kDa
ENST00000241125 (GJA3-001) 20138255-20161049 protein_coding
ENSG00000165474 (GJB2)
gap junction protein, beta 2, 26kDa
ENST00000382844 (GJB2-002) 20187472-20189780 protein_coding
ENST00000382848 (GJB2-001) 20187470-20192898 protein_coding
ENSG00000226633 (PPIAP28)
peptidylprolyl isomerase A (cyclophilin A) pseudogene 28
ENST00000458378 (PPIAP28-001) 20178978-20179462 processed_pseudogene
ENSG00000260131 (LINC00556)
long intergenic non-protein coding RNA 556
ENST00000569603 (LINC00556-001) 20181531-20181942 antisense
CIL_0003SK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048582-ENSMUSG00000046352 CGP 10090 14:57035608-57104702
GeneTranscriptPositionBiotype
ENSMUSG00000046352 (Gjb2)
gap junction protein, beta 2
ENSMUST00000055698 (Gjb2-001) 57098600-57104702 protein_coding
ENSMUSG00000048582 (Gja3)
gap junction protein, alpha 3
ENSMUST00000061614 (Gja3-201) 57035608-57058030 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SK_0001ENSG00000121743ENST00000241125ENSG00000165474ENST00000382844ENST00000382848ENSG00000226633ENST00000458378ENSG00000260131ENST00000569603CIL_0003SK_0002ENSMUSG00000046352ENSMUST00000055698ENSMUSG00000048582ENSMUST00000061614
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SK_0001ENSG00000121743ENST00000241125ENSG00000165474ENST00000382844ENST00000382848ENSG00000226633ENST00000458378ENSG00000260131ENST00000569603CIL_0003SK_0002ENSMUSG00000046352ENSMUST00000055698ENSMUSG00000048582ENSMUST00000061614
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121743 ENST00000241125 N/A 0.071±0.00 0.071±0.00 0.007±0.00 0.025±0.02 0.010±0.00 4.309±0.00 0.663±0.00 0.023±0.00 0.024±0.00 N/A 0.058±0.03 0.723±0.23 1.486±0.00
ENSG00000165474 ENST00000382844 N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382848 0.221±0.00 0.437±0.00 0.779±0.00 0.556±0.07 0.725±0.07 2.523±1.14 0.080±0.00 5.023±0.45 4.191±3.85 0.543±0.47 0.076±0.06 11.564±11.30 0.388±0.28 1.091±0.06
ENSG00000226633 ENST00000458378 N/A 0.034±0.00 N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A 0.221±0.00
ENSG00000260131 ENST00000569603 0.026±0.00 0.632±0.00 N/A 0.178±0.00 0.236±0.00 N/A 0.045±0.00 0.048±0.00 0.021±0.00 0.338±0.00 0.195±0.00 N/A N/A 0.092±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046352 ENSMUST00000055698 4.375±4.32 6.871±2.03 2.200±0.28 2.403±1.51 0.535±0.20 3.363±0.42 0.071±0.04 39.556±3.79 62.085±54.33 5.595±4.54 0.146±0.17 2.563±1.40 174.619±132.40 0.066±0.03
ENSMUSG00000048582 ENSMUST00000061614 0.373±0.10 0.033±0.01 N/A 0.067±0.01 0.051±0.01 0.040±0.00 3.195±1.18 0.505±0.05 0.028±0.03 0.278±0.12 0.055±0.00 0.081±0.04 0.304±0.39 0.144±0.06

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