C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutathione S-transferase mu 2 (muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000241337 GSTM2-002 ENSG00000213366 9606 + 1:109668066-109675286 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungMuscleOvaryPlacentaTestisENST00000241337
Transcript ID Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000241337 28.198±0.00 6.278±0.00 16.016±0.00 14.561±0.00 10.856±0.00 35.866±10.27 4.081±0.14 10.052±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TX CIL_0006TX_0002 CGP 1:109616104-109674836
CIL_0006TW CIL_0006TW_0005 CGP 1:109656081-109709551
CIL_0006TW CIL_0006TW_0006 CGP 1:109668022-109709551

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004364 IDA glutathione transferase activity
GO:0005102 IPI receptor binding
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006749 IDA glutathione metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0010880 IDA regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0010881 IC regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0014809 IC regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion
GO:0016529 IDA sarcoplasmic reticulum
GO:0018916 IDA nitrobenzene metabolic process
GO:0019899 IPI enzyme binding
GO:0042178 IDA xenobiotic catabolic process
GO:0042803 IPI protein homodimerization activity
GO:0043295 IDA glutathione binding
GO:0044281 TAS small molecule metabolic process
GO:0055119 TAS relaxation of cardiac muscle
GO:0060315 IDA negative regulation of ryanodine-sensitive calcium-release channel activity
GO:0060316 IDA positive regulation of ryanodine-sensitive calcium-release channel activity
GO:0070062 IDA extracellular vesicular exosome
GO:0070458 IDA cellular detoxification of nitrogen compound
GO:0071313 IDA cellular response to caffeine
GO:1901687 TAS glutathione derivative biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004137 Gstm7-001 protein_coding Mus_musculus 0 656
ENSMUST00000012348 Gstm2-001 protein_coding Mus_musculus 0 625
ENSMUST00000106688 Gstm7-005 protein_coding Mus_musculus 0 597
ENSMUST00000066530 Gstm2-002 protein_coding Mus_musculus 0 577
ENSMUST00000004140 Gstm1-001 protein_coding Mus_musculus 0 547
ENSMUST00000106685 Gstm6-001 protein_coding Mus_musculus 0 542
ENSMUST00000106681 Gstm6-004 protein_coding Mus_musculus 0 451
ENSMUST00000126593 Gstm1-003 protein_coding Mus_musculus 0 355
ENSMUST00000106684 Gstm6-002 protein_coding Mus_musculus 0 316
ENSMUST00000155926 Gstm6-005 nonsense_mediated_decay Mus_musculus 0 268
ENSMUST00000140420 Gstm2-003 retained_intron Mus_musculus 0 257
ENSMUST00000121684 Gm12494-001 unprocessed_pseudogene Mus_musculus 0 255
ENSMUST00000165131 Gm6665-201 protein_coding Mus_musculus 7.00649e-45 185
ENSMUST00000106680 Gstm6-003 processed_transcript Mus_musculus 7.00649e-45 185
ENSMUST00000106683 Gstm6-006 protein_coding Mus_musculus 9e-39 165
ENSMUST00000150808 Gstm2-004 retained_intron Mus_musculus 3e-33 147

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